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العنوان
Phenotypic and Molecular characterization of Linezolid-Resistant Enterococcus faecalis and Enterococcus faecium isolates from Menoufia University Hospitals /
المؤلف
Alkady, Shymaa Salah Abd-El Aziz.
هيئة الاعداد
باحث / شيماء صلاح عبد العزيز القاضي
مشرف / امل فتح الله مقلد
مناقش / سحر علي محمد علي
مناقش / ايناس محمد غنيم
الموضوع
Microbiology.
تاريخ النشر
2024.
عدد الصفحات
265 p. :
اللغة
الإنجليزية
الدرجة
الدكتوراه
التخصص
الطب (متفرقات)
تاريخ الإجازة
1/7/2024
مكان الإجازة
جامعة المنوفية - كلية الطب - قسم الميكروبيولوجيا الطبية
الفهرس
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Abstract

Enterococci, listed as priority pathogens by the WHO, are frequently
encountered in hospital-acquired infections. Additionally, owing to their
capability to thrive in diverse environments and hosts, they can lead to
various community-acquired infections. Enterococci are responsible for a
broad spectrum of infectious diseases, including urinary tract infections,
bloodstream infections, endocarditis, intraabdominal infections, skin and soft
tissue infections, and surgical site infections. The genus Enterococcus
includes several species. The most common species incriminated in human
infections are E. faecalis and E. faecium. E. faecalis is known to be more
virulent while E. faecium is known to be more resistant to antibiotics.
Treating enterococcal infections poses significant challenges due to their
inherent resistance to multiple classes of antibiotics and their remarkable
ability to acquire resistance to almost all antibiotic groups.
Due to the global spread of antimicrobial resistance in enterococci to
most of the available antibiotics, the use of antimicrobials of the last resort is
increasing. Linezolid, a critical last-resort antibiotic, demonstrates efficacy
against various clinically significant Gram-positive cocci, including S.
aureus, S. epidermidis, Enterococcus spp., and streptococci. Its mechanism of
action involves binding to the V domain of the 23S rRNA component within
the 50S ribosomal subunit. This binding impedes the formation of a
functional 70S initiation complex, disrupting bacterial protein synthesis.
Although still relatively uncommon, global rates of linezolid resistance are
increasing. Resistance to linezolid can result from alterations at the target
site, primarily through mutations in the 23S rRNA. Additionally, transferable
linezolid resistance genes have been identified in resistant strains, with
notable genes like Cfr, Cfr(B), Cfr(D), OptrA, and PoxtA contributing to this
resistance mechanism.
The objectives of this study were to isolate Enterococcus spp.,
specifically focusing on E. faecalis and E. faecium, from patients at Menoufia
University Hospitals who suffered from either hospital or communityacquired infections. Additionally, the study aimed to determine the
prevalence of these bacteria in different specimens and hospital departments,
assess their antimicrobial susceptibility patterns, identify risk factors
associated with infection by linezolid-resistant enterococci, and investigate
the genetic basis of linezolid resistance.
This study was carried out between October 2021 and April 2023 at the
Medical Microbiology and Immunology Department of Menoufia University
and the National Liver Institute. A total of 660 clinical samples were gathered
and processed using the standard microbiological procedures. The most
commonly collected specimens were urine (31.5%), followed by blood
(21%), sputum (15.9%), wound discharge (10.6%), and ascitic fluid (9.7%).
Among these samples, 102 Enterococcus spp. were isolated, comprising
15.7% of all culture-positive specimens.
Species identification of enterococcal isolates was done by Vitek -2
automated system. E. faecalis represented 54.9% of all enterococcal isolates
while E. faecium represented 43.1% and other species accounted for
approximately 2%. Focusing specifically on E. faecalis and E. faecium
isolates (totaling 100), 60% were from patients with healthcare-associated
infections (HAIs) and 40% from patients with community-acquired infections
(CAIs). HAIs were more prevalent among enterococcal infections. The mean
age of infected patients was 46.25 ±16.72 years. Analysis revealed that 68%
of infected patients had chronic medical conditions, 11% had malignant
diseases, and 89% had a history of antibiotic administration. Additionally,
50% of patients utilized medical devices, and 29% underwent invasive
procedures.